CDS

Accession Number TCMCG006C95850
gbkey CDS
Protein Id XP_013673540.1
Location join(22343094..22343549,22344782..22344943,22345016..22345231,22347098..22347306,22347404..22347491)
Gene LOC106377852
GeneID 106377852
Organism Brassica napus

Protein

Length 376aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013818086.2
Definition UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category G
Description BEST Arabidopsis thaliana protein match is RGXT1 (rhamnogalacturonan xylosyltransferase 1)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01003        [VIEW IN KEGG]
KEGG_ko ko:K11714        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008194        [VIEW IN EMBL-EBI]
GO:0008378        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016757        [VIEW IN EMBL-EBI]
GO:0016758        [VIEW IN EMBL-EBI]
GO:0016763        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0035250        [VIEW IN EMBL-EBI]
GO:0035252        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042285        [VIEW IN EMBL-EBI]
GO:0042546        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGCAGCAGCAACAACGTCCAATCTCAAACCGTCCCATTTCTTTTCTAAACCGCAACGGTCTCTTCCTCCTCCTTCTAGCTCTCCTGTTTCTCCTCGGTGTATACTTACCTCTGTCTGAAGCTCCCTTATTCCTGTTTCCAAACAGAACTTCACCATCCTCTTCTCCTTCTCCTTCTTTTGTGGTGTCCGACTGGCGCGACTATTCCCTTGCTCAAGCGGCCAAGTTTGTGGCTAAGAATGGGACGGTGATCGTCTGCTCAGTTAGTTATCCTTTCTTGCCTTTTCTCAACAACTGGCTGATTAGCATTTCTAGACAGAAGCATCATGAAAAAGTTCTCGTGATCGCTGAAGATTATGCTCTTCTGTACAAAGTTAACGAGAAGTGGCCTGGTCATGCCGTTCTCATTCCACCAGCGTTGGATCCTAAAGCCGCACACCATTTTGGTTCCCAGGGTTTCTACAATCTTACTTCTCGGAGACCACAACATCTCTTGGACATTTTGGAGCTAGGTTACAATGTTATGTACAATGATGTTGATATGGTCTGGCTACAAGATCCGTTTAAGTATTTACAGGGAAGCCACGACGTATACTTTATGGATGACATGACTGCGATTAAGCCTTTAAATCACTCTCATGGTTTACCACCGAGTCGAAACGGAGTGACTTATGTATGTAGCTGCATGATTTTCTTGCGTTGCACTAGTGGTGCAAAGCTTCTATTGAAGAAATGGGTGGAAGAAATTCGAGCTCAACCTTGGTCTAACACTGAAGCAAAGAAACCACATGATCAACCTGCTTTTAATCGGGCACTTCACAAAATAACTCAGATAGATGTCTACTTGCTTCCACAATCAGCCTTCCCGTCAGGAGGATTGTACTTCAAGAACCAGAAATGGGTTAATGAGACAAAGGGAAAACATGTGATAGTTCATAATAATTACATTGTCGGCTACAACAACAAGTTAAAACGCTTTCAAGATTTTGGTCTGTGGCTAGTCGATGATCATTCTCATCAGTCACCACTGGGAAAAATAGAGTTAGTCCAAGAGGAAAATAATGAAGAGAAGAAACAGAAGGAAAGAGGTTTAAACGGAAATATGAGTCAAAAACGGAACTTCCTCTAG
Protein:  
MAQQQQRPISNRPISFLNRNGLFLLLLALLFLLGVYLPLSEAPLFLFPNRTSPSSSPSPSFVVSDWRDYSLAQAAKFVAKNGTVIVCSVSYPFLPFLNNWLISISRQKHHEKVLVIAEDYALLYKVNEKWPGHAVLIPPALDPKAAHHFGSQGFYNLTSRRPQHLLDILELGYNVMYNDVDMVWLQDPFKYLQGSHDVYFMDDMTAIKPLNHSHGLPPSRNGVTYVCSCMIFLRCTSGAKLLLKKWVEEIRAQPWSNTEAKKPHDQPAFNRALHKITQIDVYLLPQSAFPSGGLYFKNQKWVNETKGKHVIVHNNYIVGYNNKLKRFQDFGLWLVDDHSHQSPLGKIELVQEENNEEKKQKERGLNGNMSQKRNFL